STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
minDMinD superfamily P-loop ATPase, contains an inserted ferredoxin domain. (285 aa)    
Predicted Functional Partners:
APF18765.1
Putative Fe-Mo cluster-binding protein, NifX family.
 
  
 0.951
APF18762.1
Putative DNA-binding protein, UPF0251 family.
 
     0.943
minD-2
MinD superfamily P-loop ATPase, contains an inserted ferredoxin domain.
 
    
0.820
Cabys_165
7, 8-dihydropterin-6-yl-methyl-4-(beta-D- ribofuranosyl)aminobenzene 5'-phosphate synthase.
 
     0.770
APF19027.1
7, 8-dihydropterin-6-yl-methyl-4-(beta-D- ribofuranosyl)aminobenzene 5'-phosphate synthase.
 
     0.769
APF19731.1
Hypothetical protein.
 
     0.641
APF18767.1
Putative metal-binding protein.
 
     0.535
APF18766.1
Hypothetical protein.
       0.519
Cabys_98
Soluble P-type ATPase.
  
     0.495
APF18761.1
PAS domain S-box-containing protein.
  
    0.450
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.