STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APF18815.1Putative ABC transport system ATP-binding protein. (227 aa)    
Predicted Functional Partners:
APF20718.1
Putative ABC transport system permease protein.
 
 0.984
APF20719.1
Putative ABC transport system permease protein.
 
 0.984
Cabys_298
Putative ABC transport system permease protein.
 
 0.983
APF18817.1
ABC-type transport system, involved in lipoprotein release, permease component.
 
 
 0.960
APF18818.1
ABC-type transport system, involved in lipoprotein release, permease component.
 
 
 0.937
Cabys_849
ABC-2 type transport system ATP-binding protein.
 
    
0.914
APF19803.1
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.
 
   
0.913
APF20472.1
Lipoprotein-releasing system permease protein.
 
 0.906
APF18814.1
Hypothetical protein.
 
     0.840
APF18819.1
Outer membrane lipoprotein-sorting protein.
 
 
 
 0.735
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.