STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APF19041.1TPR repeat-containing protein. (498 aa)    
Predicted Functional Partners:
coaE
coaE dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
 
     0.822
APF19042.1
Lipopolysaccharide-assembly.
 
     0.782
APF19040.1
Por secretion system C-terminal sorting domain-containing protein.
       0.773
APF19044.1
Calcineurin-like phosphoesterase.
 
     0.669
APF20705.1
LEA14-like dessication related protein.
  
     0.638
APF19772.1
Tetratricopeptide repeat-containing protein.
 
     0.598
APF17903.1
Cytochrome c-type biogenesis protein CcmF.
  
 
 0.509
APF18969.1
Cytochrome c-type biogenesis protein CcmF.
  
 
 0.509
APF19043.1
Regulatory protein, Fis family.
       0.500
Cabys_402
Membrane protease YdiL, CAAX protease family.
  
     0.479
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.