STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APF19369.1Transposase DDE domain-containing protein. (752 aa)    
Predicted Functional Partners:
APF17765.1
Hypothetical protein.
  
     0.560
APF19370.1
Transposase.
       0.517
APF19254.1
Transposase.
  
     0.499
APF18697.1
Transposase.
  
     0.498
Cabys_124
Transposase.
  
     0.497
APF18093.1
Transposase.
  
     0.496
APF19445.1
Transposase.
  
     0.496
APF19597.1
Transposase.
  
     0.496
APF19703.1
Transposase.
  
     0.496
APF19738.1
Transposase.
  
     0.496
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
Server load: low (12%) [HD]