STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APF19687.1Lipid kinase, YegS/Rv2252/BmrU family. (289 aa)    
Predicted Functional Partners:
APF18630.1
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
 
  
 0.931
APF17988.1
Lipid kinase, YegS/Rv2252/BmrU family.
  
  
 
0.916
Cabys_719
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
 0.906
APF17856.1
Glycosyltransferase involved in cell wall bisynthesis.
   
 
  0.901
APF19182.1
Glycosyltransferase involved in cell wall bisynthesis.
   
 
  0.901
APF19339.1
Glycerol-3-phosphate dehydrogenase.
   
 0.861
gpsA
gpsA glycerol 3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
     
 0.802
APF19688.1
Endoribonuclease L-PSP.
       0.773
APF19684.1
Hypothetical protein.
       0.706
APF19685.1
Uncharacterized conserved protein YfiM, DUF2279 family.
       0.693
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.