Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cabys_320Cytochrome b subunit of formate dehydrogenase. (649 aa)    
Predicted Functional Partners:
APF19861.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
  
 
 0.992
Cabys_57
4Fe-4S binding domain-containing protein.
  
 
 0.938
Cabys_329
Fe-S-cluster-containing dehydrogenase component.
 
 
 0.935
APF18017.1
Fe-S-cluster-containing dehydrogenase component.
 
 
 0.895
APF18018.1
Thiosulfate reductase / polysulfide reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.877
Cabys_322
Doubled CXXCH domain-containing protein.
 
 
 0.868
napA
Periplasmic nitrate reductase subunit NapA apoprotein; Catalytic subunit of the nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
  
 
 0.838
APF20424.1
NAD(P)-dependent iron-only hydrogenase catalytic subunit.
  
  
 0.787
Cabys_332
HAMP domain-containing protein.
  
 
   0.749
Cabys_330
Ni/Fe-hydrogenase 2 integral membrane subunit HybB.
 
   
 0.733
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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