STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lipAlipA lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. (320 aa)    
Predicted Functional Partners:
APF19000.1
Lipoate-protein ligase A.
 
 
 0.992
APF19358.1
Lipoate-protein ligase A.
 
 
 0.941
gcvH
gcvH glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
 
 
 0.720
Cabys_333
Glycine cleavage H-protein.
   
 0.689
Cabys_334
Glycine cleavage H-protein.
   
 0.689
APF20253.1
2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase).
 
  
 0.685
APF20254.1
2-oxoisovalerate dehydrogenase E1 component.
 
  
 0.644
Cabys_78
Dihydrolipoamide dehydrogenase.
  
 0.638
APF18661.1
2-oxoglutarate dehydrogenase E2 component.
 
  
 0.637
APF20052.1
Carbon-nitrogen hydrolase.
  
  
 0.563
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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