STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APF20187.1Capsule assembly protein Wzi. (527 aa)    
Predicted Functional Partners:
APF20184.1
Glycosyltransferase, GT2 family.
 
     0.769
Cabys_764
Putative glycerol-1-phosphate prenyltransferase.
  
     0.768
APF20480.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.754
APF20581.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.754
APF20185.1
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase.
 
     0.750
APF17929.1
Glycosyltransferase like family 2.
  
     0.746
APF17930.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
  
     0.736
APF20186.1
ATP-dependent DNA helicase RecG.
       0.732
APF19462.1
Hypothetical protein.
  
     0.723
APF20479.1
Hypothetical protein.
  
     0.722
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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