STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cabys_370Glucose-1-phosphate adenylyltransferase. (424 aa)    
Predicted Functional Partners:
glgA-2
glgA glycogen synthase (ADP-glucose); Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 0.997
glgA
glgA glycogen synthase (ADP-glucose); Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 0.996
APF20305.1
Maltodextrin phosphorylase.
 
 
 0.988
APF19826.1
Glycogen operon protein; Belongs to the glycosyl hydrolase 13 family.
  
 0.968
APF20027.1
Phosphomannomutase / phosphoglucomutase.
 
 
 0.934
Cabys_170
Alpha amylase, catalytic domain.
 
  
 0.918
APF17982.1
Alpha-amylase.
    
  0.911
APF19318.1
Cellobiose phosphorylase.
     
  0.900
APF18482.1
Argininosuccinate synthase.
  
  
 0.888
Cabys_37
Por secretion system C-terminal sorting domain-containing protein; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.885
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.