STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cabys_377Thioredoxin reductase (NADPH). (310 aa)    
Predicted Functional Partners:
APF19155.1
Thioredoxin; Belongs to the thioredoxin family.
 
 0.965
APF20646.1
Thioredoxin; Belongs to the thioredoxin family.
 
 0.965
APF20645.1
Glutaredoxin-like domain protein.
 
  
 0.934
APF18880.1
Selenate reductase, Fe-S subunit.
  
 
 0.923
APF18981.1
Putative bacillithiol system oxidoreductase, YpdA family.
 
  
 
0.917
APF18826.1
Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 
  0.916
APF18088.1
Methionine-gamma-lyase.
   
 
 0.911
APF18555.1
Methionine-gamma-lyase.
   
 
 0.911
selD
selD selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP.
     
 0.910
APF20099.1
Thioredoxin; Belongs to the thioredoxin family.
 
 
 0.660
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.