STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APF20567.1Response regulator receiver protein. (126 aa)    
Predicted Functional Partners:
Cabys_499
PAS domain S-box-containing protein.
 
 
0.833
APF18495.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 
 0.832
Cabys_316
Signal transduction histidine kinase.
 
 
0.811
APF19980.1
His Kinase A (phospho-acceptor) domain-containing protein.
  
 
   0.805
APF19596.1
PAS domain S-box-containing protein.
 
 
 
 0.800
APF20427.1
Signal transduction histidine kinase.
 
   0.799
APF18998.1
Two-component system, cell cycle response regulator/two-component system, unclassified family, sensor histidine kinase and response regulator.
  
   0.795
APF17971.1
Response regulator receiver domain-containing protein.
  
   0.794
APF20902.1
Signal transduction histidine kinase.
  
 
   0.793
Cabys_978
Response regulator receiver domain-containing protein.
  
   0.793
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.