STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APF20674.1Cu+-exporting ATPase. (818 aa)    
Predicted Functional Partners:
APF18455.1
Pyridine nucleotide-disulfide oxidoreductase, dimerization domain.
 
 
 0.776
APF20675.1
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
       0.741
APF20895.1
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA).
 
 
 0.671
APF20616.1
Cd2+/Zn2+-exporting ATPase.
 
 
0.638
APF20892.1
Hypothetical protein.
 
 
 0.637
APF20673.1
Putative nicotinamide N-methyase.
     
 0.622
APF18962.1
Cu2+-exporting ATPase.
 
 
0.615
APF18999.1
Molybdopterin-guanine dinucleotide biosynthesis protein A/copper chaperone.
 
 
 0.606
APF19846.1
Cobalt-zinc-cadmium efflux system protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
 
  
 0.605
Cabys_52
Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
 
 
 0.580
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.