STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APF20689.1UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (326 aa)    
Predicted Functional Partners:
APF19550.1
Galactokinase; Belongs to the GHMP kinase family.
 
 
 0.938
APF18282.1
UDP-glucose 4-epimerase.
 
0.937
APF19218.1
UDP-glucose dehydrogenase.
  
 
 0.935
APF19553.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
  
 0.925
APF20953.1
D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase.
    
 0.846
APF18338.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
  
 0.752
APF19079.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
0.558
APF20185.1
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase.
  
  
 0.510
APF20146.1
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase.
  
 
 0.460
APF18254.1
Glycosyltransferase, GT2 family.
  
  
 0.457
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.