STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APF20845.1Planctomycete cytochrome C. (133 aa)    
Predicted Functional Partners:
APF19852.1
Cytochrome c oxidase subunit 3.
  
 
 0.930
APF18007.1
Rieske (2Fe-2S) domain-containing protein.
  
 
 0.916
APF19307.1
Cytochrome b6-f complex iron-sulfur subunit.
  
 
 0.916
APF19861.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
 
 
 0.913
APF18008.1
Cytochrome b/b6/petB.
  
 
 0.900
APF19306.1
Ubiquinol-cytochrome c reductase cytochrome b subunit/cytochrome b6.
  
 
 0.900
APF19851.1
Cytochrome C oxidase subunit IV.
 
 
 
 0.881
APF19862.1
Cytochrome c7.
 
 
 0.858
norZ
Nitric oxide reductase, NorZ apoprotein.
  
 
 0.853
APF19853.1
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
  
 
 0.847
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.