STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cabys_488Bleomycin hydrolase; Belongs to the peptidase C1 family. (377 aa)    
Predicted Functional Partners:
Cabys_490
ABC-2 type transport system ATP-binding protein.
  
    0.756
Cabys_489
Hypothetical protein.
       0.752
Cabys_163
Peptidase S46; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
  
     0.653
APF19003.1
Peptidase M64 N-terminus.
  
     0.651
APF18459.1
Peptidase S46; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
  
     0.638
Cabys_178
Nitrate/nitrite transporter NarK.
  
     0.618
APF20757.1
Hypothetical protein.
  
     0.581
APF19847.1
Xaa-Pro aminopeptidase.
 
  
 0.544
APF19819.1
Dipeptidyl-peptidase-4.
  
     0.527
Cabys_491
Uncharacterized conserved protein YbbC, DUF1343 family.
       0.496
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.