STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cabys_507Manganese/zinc/iron transport system permease protein. (377 aa)    
Predicted Functional Partners:
Cabys_508
Manganese/zinc/iron transport system ATP- binding protein.
 0.999
Cabys_509
Manganese/zinc/iron transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 0.997
Cabys_506
Manganese/zinc/iron transport system permease protein.
 
  
 
0.982
Cabys_563
ABC-type metal ion transporter, periplasmic subunit; Zinc/manganese transport system substrate-binding protein/zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.834
Cabys_309
Zinc transport system ATP-binding protein.
  
 
 0.822
Cabys_561
ABC-type Mn2+/Zn2+ transport system, permease component.
  
  
 
0.488
APF18751.1
Lipopolysaccharide export system ATP-binding protein.
 
   
 0.425
fur
Fur family transcriptional regulator, peroxide stress response regulator; Belongs to the Fur family.
  
  
 0.404
APF19375.1
Cobalt/nickel transport system permease protein.
     
 0.401
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.