STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cabys_880Electron transfer flavoprotein beta subunit. (296 aa)    
Predicted Functional Partners:
Cabys_294
Electron transfer flavoprotein alpha subunit apoprotein.
 0.999
Cabys_881
Electron transfer flavoprotein alpha subunit apoprotein.
 0.999
Cabys_882
Hypothetical protein.
 
 0.984
APF18412.1
Acyl-CoA dehydrogenase.
 
 0.953
APF19601.1
butyryl-CoA dehydrogenase/short/branched chain acyl-CoA dehydrogenase.
 
 0.940
Cabys_788
Membrane bound protein complex subunit mbxN.
  
 
 0.889
Cabys_483
glutaryl-CoA dehydrogenase.
 
 0.883
Cabys_262
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.874
Cabys_292
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.857
APF18121.1
D-lactate dehydrogenase.
  
 
 0.756
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.