STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cabys_92Rieske (2Fe-2S) domain-containing protein. (102 aa)    
Predicted Functional Partners:
APF18831.1
Glutamine synthetase.
   
 
 0.922
napA
Periplasmic nitrate reductase subunit NapA apoprotein; Catalytic subunit of the nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
  
 
 0.921
APF19293.1
Seven times multi-heme cytochrome CxxCH.
   
 
 0.909
APF18952.1
Seven times multi-heme cytochrome CxxCH.
   
 
  0.901
APF19305.1
Seven times multi-heme cytochrome CxxCH.
   
 
  0.901
APF17904.1
Glutamate dehydrogenase (NADP); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
  0.900
APF17907.1
Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
  0.900
APF18301.1
Glutamate dehydrogenase (NAD/NADP); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
  0.900
APF18802.1
L-glutamine synthetase.
     
  0.900
yrpB
NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family.
     
  0.900
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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