STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF11965.1Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1032 aa)    
Predicted Functional Partners:
AHF11995.1
Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.946
AHF13125.1
Glucan 1,6-alpha-isomaltosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.934
AHF12350.1
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family.
  
  
 
0.929
AHF12561.1
Glycosyl hydrolase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.912
AHF11603.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.905
AHF11955.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.905
AHF12198.1
Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.905
AHF13129.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.905
AHF13130.1
Glucosylceramidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 30 family.
  
 
 0.905
AHF13299.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.905
Your Current Organism:
Barnesiella viscericola
NCBI taxonomy Id: 880074
Other names: B. viscericola DSM 18177, Barnesiella viscericola C46, Barnesiella viscericola DSM 18177, Barnesiella viscericola JCM 13660, Barnesiella viscericola str. DSM 18177, Barnesiella viscericola strain DSM 18177
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.