Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
D8QVM8_SELML | D8RES0_SELML | D8QVM8 | D8RES0 | Uncharacterized protein. | Uncharacterized protein. | 0.489 |
D8QVM8_SELML | D8TE91_SELML | D8QVM8 | D8TE91 | Uncharacterized protein. | Cytochrom_B559 domain-containing protein. | 0.429 |
D8QVM8_SELML | PsbH | D8QVM8 | D8TE98 | Uncharacterized protein. | Uncharacterized protein. | 0.421 |
D8QVM8_SELML | psbD | D8QVM8 | C7B2K2 | Uncharacterized protein. | Photosystem II D2 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex. | 0.427 |
D8QVM8_SELML | psbE | D8QVM8 | C7B2G7 | Uncharacterized protein. | Cytochrome b559 subunit alpha; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. | 0.427 |
D8QVM8_SELML | psbJ | D8QVM8 | C7B2G6 | Uncharacterized protein. | Photosystem II protein J. | 0.406 |
D8RES0_SELML | D8QVM8_SELML | D8RES0 | D8QVM8 | Uncharacterized protein. | Uncharacterized protein. | 0.489 |
D8TE91_SELML | D8QVM8_SELML | D8TE91 | D8QVM8 | Cytochrom_B559 domain-containing protein. | Uncharacterized protein. | 0.429 |
D8TE91_SELML | PsbH | D8TE91 | D8TE98 | Cytochrom_B559 domain-containing protein. | Uncharacterized protein. | 0.982 |
D8TE91_SELML | psbD | D8TE91 | C7B2K2 | Cytochrom_B559 domain-containing protein. | Photosystem II D2 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex. | 0.979 |
D8TE91_SELML | psbE | D8TE91 | C7B2G7 | Cytochrom_B559 domain-containing protein. | Cytochrome b559 subunit alpha; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. | 0.986 |
D8TE91_SELML | psbJ | D8TE91 | C7B2G6 | Cytochrom_B559 domain-containing protein. | Photosystem II protein J. | 0.990 |
PsbH | D8QVM8_SELML | D8TE98 | D8QVM8 | Uncharacterized protein. | Uncharacterized protein. | 0.421 |
PsbH | D8TE91_SELML | D8TE98 | D8TE91 | Uncharacterized protein. | Cytochrom_B559 domain-containing protein. | 0.982 |
PsbH | psbD | D8TE98 | C7B2K2 | Uncharacterized protein. | Photosystem II D2 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex. | 0.995 |
PsbH | psbE | D8TE98 | C7B2G7 | Uncharacterized protein. | Cytochrome b559 subunit alpha; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. | 0.994 |
PsbH | psbJ | D8TE98 | C7B2G6 | Uncharacterized protein. | Photosystem II protein J. | 0.987 |
psbD | D8QVM8_SELML | C7B2K2 | D8QVM8 | Photosystem II D2 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex. | Uncharacterized protein. | 0.427 |
psbD | D8TE91_SELML | C7B2K2 | D8TE91 | Photosystem II D2 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex. | Cytochrom_B559 domain-containing protein. | 0.979 |
psbD | PsbH | C7B2K2 | D8TE98 | Photosystem II D2 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex. | Uncharacterized protein. | 0.995 |
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