STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8R409_SELMLAlpha-carbonic anhydrase domain-containing protein. (245 aa)    
Predicted Functional Partners:
D8SNC7_SELML
Cyanate_lyase domain-containing protein.
     
  0.650
D8SRE7_SELML
Cyanate_lyase domain-containing protein.
     
  0.650
D8QP31_SELML
Brix domain-containing protein.
   
 
 0.563
D8SIZ5_SELML
Brix domain-containing protein.
   
 
 0.563
D8SCT8_SELML
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.537
D8SX75_SELML
Brix domain-containing protein.
   
    0.521
D8T6V6_SELML
Brix domain-containing protein.
   
    0.521
D8R9P8_SELML
Ribosomal_L18_c domain-containing protein.
    
 
 0.519
D8SE79_SELML
Ribosomal_L18_c domain-containing protein.
    
 
 0.519
D8QQV6_SELML
PUM-HD domain-containing protein.
   
    0.461
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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