STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8R8Q7_SELMLUncharacterized protein. (941 aa)    
Predicted Functional Partners:
D8QX85_SELML
Membrin; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
    
 0.987
D8REG1_SELML
t-SNARE coiled-coil homology domain-containing protein.
    
 0.987
D8S7L2_SELML
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.979
D8T3Y6_SELML
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.979
D8RQ98_SELML
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.956
D8SWT2_SELML
Uncharacterized protein.
    
 0.956
D8RMA4_SELML
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.929
D8SLD5_SELML
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.929
D8RP86_SELML
Coatamer_beta_C domain-containing protein.
   
 0.850
D8T279_SELML
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.850
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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