STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8RF75_SELMLHistone H2A; Belongs to the histone H2A family. (136 aa)    
Predicted Functional Partners:
D8R2U1_SELML
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
  
 0.976
D8QUC4_SELML
Uncharacterized protein.
    
 0.876
D8QUV3_SELML
Uncharacterized protein.
    
 0.876
D8S8X5_SELML
Ribosomal_S27 domain-containing protein.
   
  0.874
D8SIA6_SELML
Histone domain-containing protein; Belongs to the histone H2B family.
  
 0.830
D8SW41_SELML
Histone domain-containing protein; Belongs to the histone H2B family.
  
 0.830
D8R3L7_SELML
Histone domain-containing protein; Belongs to the histone H2B family.
  
 0.829
D8S8M8_SELML
Uncharacterized protein.
    
  0.829
D8R9N1_SELML
RPOL4c domain-containing protein.
    
  0.826
D8RNW6_SELML
Histone H2B; Belongs to the histone H2B family.
  
 0.826
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.