STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8RGA8_SELMLUncharacterized protein. (983 aa)    
Predicted Functional Partners:
D8RHS2_SELML
DAGKc domain-containing protein.
     
 0.933
D8S4Y3_SELML
DAGKc domain-containing protein.
     
 0.933
D8SQD3_SELML
Bgal_small_N domain-containing protein; Belongs to the glycosyl hydrolase 2 family.
     
 0.921
D8SUJ8_SELML
Bgal_small_N domain-containing protein; Belongs to the glycosyl hydrolase 2 family.
     
 0.921
D8R2M6_SELML
Neutral ceramidase.
     
 0.916
D8ST79_SELML
Neutral ceramidase.
     
 0.916
D8T2E4_SELML
Neutral ceramidase.
     
 0.916
D8TDK8_SELML
Neutral ceramidase.
     
 0.916
D8QRG3_SELML
Sphingolipid delta(4)-desaturase DES1-like; Sphingolipid-delta-4-desaturase required for the biosynthesis of delta-4-unsaturated sphingolipids and derivatives.
     
 0.900
D8R4K0_SELML
Beta-galactosidase.
     
  0.900
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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