STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8RJI9_SELMLUncharacterized protein; Belongs to the cyclin family. (274 aa)    
Predicted Functional Partners:
CDKD-1
Uncharacterized protein CDKD-1; Belongs to the protein kinase superfamily.
     
 0.913
D8QX48_SELML
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
    
 0.880
D8SXY8_SELML
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
    
 0.880
CYCH-1
Uncharacterized protein CYCH-1; Belongs to the cyclin family.
     
 0.878
CYCH-2
Uncharacterized protein CYCH-2; Belongs to the cyclin family.
     
 0.878
D8QUG7_SELML
Protein kinase domain-containing protein.
   
 0.860
D8RDZ0_SELML
Protein kinase domain-containing protein.
   
 0.860
D8T0C5_SELML
Protein kinase domain-containing protein.
   
 0.860
D8T301_SELML
Protein kinase domain-containing protein.
   
 0.860
D8QYE2_SELML
Uncharacterized protein.
   
 
 0.835
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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