STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8RKK0_SELMLLaccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. (562 aa)    
Predicted Functional Partners:
CCR1-1
Cinnamoyl-CoA reductase.
   
  
 0.599
D8SRF7_SELML
Epimerase domain-containing protein.
   
  
 0.599
CCR1-2
Cinnamoyl-CoA reductase.
   
  
 0.599
D8R4T9_SELML
Epimerase domain-containing protein.
   
  
 0.539
D8R4V2_SELML
3Beta_HSD domain-containing protein; Belongs to the 3-beta-HSD family.
   
  
 0.539
D8R627_SELML
Epimerase domain-containing protein.
   
  
 0.539
D8S441_SELML
3Beta_HSD domain-containing protein; Belongs to the 3-beta-HSD family.
   
  
 0.539
D8S454_SELML
Epimerase domain-containing protein.
   
  
 0.539
D8SND6_SELML
Epimerase domain-containing protein.
   
  
 0.539
D8T9B4_SELML
Epimerase domain-containing protein.
   
  
 0.539
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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