STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SmABCI6ATP-binding cassette transporter, subfamily I, member 6, SmABCI6. (258 aa)    
Predicted Functional Partners:
D8RB01_SELML
Uncharacterized protein.
      
 0.526
D8RHE6_SELML
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
      
 0.526
D8QTZ1_SELML
Uncharacterized protein.
     
 0.491
D8RJN2_SELML
Uncharacterized protein.
     
 0.491
D8SN84_SELML
Uncharacterized protein.
     
 0.491
D8R0R6_SELML
Uncharacterized protein.
      
 0.485
D8R5B4_SELML
Uncharacterized protein.
      
 0.485
SmABCI8
ATP-binding cassette transporter, subfamily I, member 8, SmABCI8.
    
 0.457
D8SZF5_SELML
ABC transporter domain-containing protein.
    
 0.457
D8RSK7_SELML
Lactamase_B domain-containing protein.
     
 0.434
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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