STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUL4-1Ubiquitin-protein ligase, Cullin 4; Belongs to the cullin family. (766 aa)    
Predicted Functional Partners:
DDB1-1
Uncharacterized protein DDB1-1.
  
 0.986
DDB1-2
Uncharacterized protein DDB1-2.
  
 0.986
D8QSE9_SELML
TIP120 domain-containing protein.
   
 0.984
D8T3M3_SELML
RING-type domain-containing protein.
    
 0.975
D8TA94_SELML
RING-type domain-containing protein.
    
 0.975
COP8-1
Uncharacterized protein COP8-1.
    
 0.970
CSN6-1
Uncharacterized protein CSN6-1.
    
 0.967
JAB1-1
Uncharacterized protein JAB1-1.
    
 0.961
JAB1-2
Uncharacterized protein JAB1-2.
    
 0.961
FUS12-1
Uncharacterized protein FUS12-1.
   
 0.960
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.