STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8RUW5_SELMLCBFD_NFYB_HMF domain-containing protein. (297 aa)    
Predicted Functional Partners:
D8QVD4_SELML
Uncharacterized protein.
    
 
 0.940
D8RF83_SELML
Uncharacterized protein.
    
 
 0.940
D8R2T0_SELML
CBFD_NFYB_HMF domain-containing protein.
   
 
 0.925
D8RWU4_SELML
Uncharacterized protein.
   
 
 0.925
D8TD40_SELML
Uncharacterized protein.
   
 
 0.925
D8TAU2_SELML
Uncharacterized protein.
    
 
 0.897
D8TDQ9_SELML
Uncharacterized protein.
    
 
 0.897
D8S283_SELML
DNL-type domain-containing protein.
   
  
 0.515
D8R6K7_SELML
Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.
      
 0.509
D8S4D5_SELML
Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.
      
 0.509
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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