STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHR13-1Uncharacterized protein CHR13-1. (2063 aa)    
Predicted Functional Partners:
D8R4G5_SELML
RuvB-like helicase; Belongs to the RuvB family.
    
 0.989
D8T674_SELML
SANT domain-containing protein.
   
 0.982
D8T7T8_SELML
SANT domain-containing protein.
   
 0.982
D8QYN3_SELML
RuvB-like helicase; Belongs to the RuvB family.
    
 0.980
D8R904_SELML
RuvB-like helicase; Belongs to the RuvB family.
    
 0.980
D8RM93_SELML
HIT-type domain-containing protein.
    
 0.972
D8SLC5_SELML
HIT-type domain-containing protein.
    
 0.972
D8R5L0_SELML
Uncharacterized protein; Belongs to the actin family.
    
 0.966
D8SFD7_SELML
Uncharacterized protein; Belongs to the actin family.
    
 0.966
D8S620_SELML
YL1_C domain-containing protein.
    
 0.959
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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