STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPK13-1Calcium dependent protein kinase 7. (531 aa)    
Predicted Functional Partners:
D8S3C5_SELML
Uncharacterized protein; Belongs to the AAA ATPase family.
    
 
 0.513
D8S7W3_SELML
Uncharacterized protein; Belongs to the AAA ATPase family.
    
 
 0.513
D8RIH5_SELML
EF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family.
      
 0.491
D8S3C7_SELML
Protein kinase domain-containing protein.
  
 
  0.452
D8S7W1_SELML
Protein kinase domain-containing protein.
  
 
  0.448
D8SID3_SELML
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
  0.430
D8S773_SELML
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
     
 0.415
D8SYZ7_SELML
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
     
 0.415
D8SBV1_SELML
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
 0.408
D8RTI3_SELML
SCP domain-containing protein; Belongs to the CRISP family.
      
 0.400
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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