Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
D8QX40_SELML | D8RVZ2_SELML | D8QX40 | D8RVZ2 | NifU_N domain-containing protein; Belongs to the NifU family. | Uncharacterized protein. | 0.950 |
D8QX40_SELML | D8RZ62_SELML | D8QX40 | D8RZ62 | NifU_N domain-containing protein; Belongs to the NifU family. | Uncharacterized protein; Belongs to the complex I LYR family. | 0.940 |
D8QX40_SELML | D8SVL6_SELML | D8QX40 | D8SVL6 | NifU_N domain-containing protein; Belongs to the NifU family. | Uncharacterized protein. | 0.950 |
D8RVZ2_SELML | D8QX40_SELML | D8RVZ2 | D8QX40 | Uncharacterized protein. | NifU_N domain-containing protein; Belongs to the NifU family. | 0.950 |
D8RVZ2_SELML | D8RZ62_SELML | D8RVZ2 | D8RZ62 | Uncharacterized protein. | Uncharacterized protein; Belongs to the complex I LYR family. | 0.975 |
D8RVZ2_SELML | D8SVL6_SELML | D8RVZ2 | D8SVL6 | Uncharacterized protein. | Uncharacterized protein. | 0.900 |
D8RZ62_SELML | D8QX40_SELML | D8RZ62 | D8QX40 | Uncharacterized protein; Belongs to the complex I LYR family. | NifU_N domain-containing protein; Belongs to the NifU family. | 0.940 |
D8RZ62_SELML | D8RVZ2_SELML | D8RZ62 | D8RVZ2 | Uncharacterized protein; Belongs to the complex I LYR family. | Uncharacterized protein. | 0.975 |
D8RZ62_SELML | D8SVL6_SELML | D8RZ62 | D8SVL6 | Uncharacterized protein; Belongs to the complex I LYR family. | Uncharacterized protein. | 0.975 |
D8RZ62_SELML | D8TE59_SELML | D8RZ62 | D8TE59 | Uncharacterized protein; Belongs to the complex I LYR family. | Photosystem II reaction center protein Z; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna. | 0.958 |
D8RZ62_SELML | D8TE91_SELML | D8RZ62 | D8TE91 | Uncharacterized protein; Belongs to the complex I LYR family. | Cytochrom_B559 domain-containing protein. | 0.958 |
D8RZ62_SELML | Lhcb5-1 | D8RZ62 | D8S9D6 | Uncharacterized protein; Belongs to the complex I LYR family. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.954 |
D8RZ62_SELML | PsbH | D8RZ62 | D8TE98 | Uncharacterized protein; Belongs to the complex I LYR family. | Uncharacterized protein. | 0.958 |
D8RZ62_SELML | psbD | D8RZ62 | C7B2K2 | Uncharacterized protein; Belongs to the complex I LYR family. | Photosystem II D2 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex. | 0.960 |
D8RZ62_SELML | psbE | D8RZ62 | C7B2G7 | Uncharacterized protein; Belongs to the complex I LYR family. | Cytochrome b559 subunit alpha; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. | 0.957 |
D8RZ62_SELML | psbJ | D8RZ62 | C7B2G6 | Uncharacterized protein; Belongs to the complex I LYR family. | Photosystem II protein J. | 0.956 |
D8SVL6_SELML | D8QX40_SELML | D8SVL6 | D8QX40 | Uncharacterized protein. | NifU_N domain-containing protein; Belongs to the NifU family. | 0.950 |
D8SVL6_SELML | D8RVZ2_SELML | D8SVL6 | D8RVZ2 | Uncharacterized protein. | Uncharacterized protein. | 0.900 |
D8SVL6_SELML | D8RZ62_SELML | D8SVL6 | D8RZ62 | Uncharacterized protein. | Uncharacterized protein; Belongs to the complex I LYR family. | 0.975 |
D8TE59_SELML | D8RZ62_SELML | D8TE59 | D8RZ62 | Photosystem II reaction center protein Z; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna. | Uncharacterized protein; Belongs to the complex I LYR family. | 0.958 |
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