STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAT3-1Uncharacterized protein LAT3-1. (491 aa)    
Predicted Functional Partners:
D8R4T6_SELML
IGPS domain-containing protein.
   
 
 0.606
D8QU53_SELML
Alpha-amylase.
    
 0.567
D8QV30_SELML
Alpha-amylase.
    
 0.567
SS1
Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
    
 0.567
D8R0H5_SELML
Uncharacterized protein.
    
 0.567
D8RMH8_SELML
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
    
 0.567
GBSS
Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
    
 0.567
D8SC77_SELML
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
    
 0.567
SS2
Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
    
 0.567
D8SLL1_SELML
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
    
 0.567
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.