STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8S4M5_SELMLSEC7 domain-containing protein. (1224 aa)    
Predicted Functional Partners:
AGB1-2
Uncharacterized protein AGB1-2.
      
 0.609
D8T0J7_SELML
Uncharacterized protein; Belongs to the DOCK family.
  
   
 0.575
D8TER0_SELML
Uncharacterized protein; Belongs to the DOCK family.
  
   
 0.567
D8S0P4_SELML
Uncharacterized protein.
      
 0.538
D8RDI9_SELML
Uncharacterized protein.
      
 0.513
D8R032_SELML
Eukaryotic translation initiation factor 5A.
      
 0.493
D8SZV2_SELML
Eukaryotic translation initiation factor 5A.
      
 0.493
D8QNN2_SELML
FMN hydroxy acid dehydrogenase domain-containing protein.
      
 0.485
ArfB-1
ARF family GTPase; Belongs to the small GTPase superfamily. Arf family.
    
 0.455
TOR-1
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
   
 
 0.453
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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