STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYP94J3Medium chain fatty acid hydroxylase. (461 aa)    
Predicted Functional Partners:
CYP780A7
Uncharacterized protein CYP780A7; Belongs to the cytochrome P450 family.
  
     0.472
D8RGF6_SELML
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
  
  0.459
CYP780B1
Uncharacterized protein CYP780B1; Belongs to the cytochrome P450 family.
  
     0.432
D8S4Q7_SELML
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
  
  0.429
CYP790B1
Uncharacterized protein CYP790B1; Belongs to the cytochrome P450 family.
  
  
  0.423
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.