STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8S981_SELMLXyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family. (280 aa)    
Predicted Functional Partners:
D8RGA4_SELML
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 
 0.731
D8R4P2_SELML
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.576
D8RK05_SELML
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.576
D8QSH9_SELML
Uncharacterized protein.
    
 
 0.456
D8R1P5_SELML
Uncharacterized protein.
    
 
 0.456
D8S6A3_SELML
Uncharacterized protein.
    
 
 0.456
D8SU55_SELML
Uncharacterized protein.
    
 
 0.456
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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