STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BIG1-2Uncharacterized protein BIG1-2. (4647 aa)    
Predicted Functional Partners:
D8QU62_SELML
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 
 0.594
D8QV21_SELML
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 
 0.594
D8SRH3_SELML
Uncharacterized protein.
   
  
 0.581
D8S0R6_SELML
Ubiquitin-conjugating enzyme 25, E2-like protein.
   
 
 0.466
D8SBE2_SELML
Ubiquitin-conjugating enzyme 25, E2-like protein.
   
 
 0.466
UPL3-2
Ubiquitin-protein ligase, UPL3.
   
 
 0.465
UPL3-1
Ubiquitin-protein ligase, UPL3.
   
 
 0.465
D8QUD1_SELML
Uncharacterized protein.
   
 0.459
D8R3Z8_SELML
Uncharacterized protein.
   
 0.459
D8QNA7_SELML
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
     
 0.434
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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