STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8SBV6_SELMLUncharacterized protein. (391 aa)    
Predicted Functional Partners:
D8STL4_SELML
Importin N-terminal domain-containing protein.
    
 0.977
D8STN0_SELML
Importin N-terminal domain-containing protein.
    
 0.977
D8T554_SELML
Importin N-terminal domain-containing protein.
    
 0.977
D8QTG2_SELML
Uncharacterized protein.
  
  
 
0.900
D8SK49_SELML
C2H2-type domain-containing protein.
    
 0.893
D8T4G9_SELML
C2H2-type domain-containing protein.
    
 0.893
D8R512_SELML
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.877
RAN-1
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 
 0.872
D8QR66_SELML
Sm domain-containing protein.
    
 0.817
D8TFL4_SELML
Uncharacterized protein.
    
 
 0.784
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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