STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8SH46_SELMLUncharacterized protein. (588 aa)    
Predicted Functional Partners:
D8SHK2_SELML
Splicing factor subunit; Belongs to the SF3B5 family.
   
 0.969
D8S5W4_SELML
Uncharacterized protein.
    
 0.955
D8R512_SELML
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.954
D8QR66_SELML
Sm domain-containing protein.
    
 0.952
D8RTJ7_SELML
RRM domain-containing protein.
    
 0.952
D8RA33_SELML
Small nuclear ribonucleoprotein G.
    
 0.946
D8RPX7_SELML
Sm domain-containing protein.
    
  0.934
D8RFX7_SELML
Tr-type G domain-containing protein.
   
 
 0.919
D8RQI0_SELML
PSP domain-containing protein.
   
 0.911
D8RXJ6_SELML
PSP domain-containing protein.
   
 0.911
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.