STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8SHB0_SELMLPeptidylprolyl isomerase. (569 aa)    
Predicted Functional Partners:
D8TCN6_SELML
N_BRCA1_IG domain-containing protein.
    
 
 0.579
D8R065_SELML
CS domain-containing protein.
   
 0.472
D8R960_SELML
CS domain-containing protein.
   
 0.472
D8SZR6_SELML
CS domain-containing protein.
   
 0.472
D8T9W3_SELML
CS domain-containing protein.
   
 0.472
D8RVL2_SELML
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
  0.442
D8T011_SELML
Uncharacterized protein.
   
 
  0.428
D8QSI5_SELML
S1-like domain-containing protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
   
   0.427
D8QXU2_SELML
S1-like domain-containing protein.
   
   0.427
D8RUK8_SELML
S1-like domain-containing protein.
   
   0.427
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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