Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C4H1-1 | C4H1-2 | D8S0Y1 | D8SBK8 | Trans-cinnamate 4-hydroxylase; Belongs to the cytochrome P450 family. | Trans-cinnamate 4-hydroxylase; Belongs to the cytochrome P450 family. | 0.900 |
C4H1-1 | PAL2-2 | D8S0Y1 | D8SHQ0 | Trans-cinnamate 4-hydroxylase; Belongs to the cytochrome P450 family. | Phenylalanine ammonia-lyase. | 0.921 |
C4H1-2 | C4H1-1 | D8SBK8 | D8S0Y1 | Trans-cinnamate 4-hydroxylase; Belongs to the cytochrome P450 family. | Trans-cinnamate 4-hydroxylase; Belongs to the cytochrome P450 family. | 0.900 |
C4H1-2 | PAL2-2 | D8SBK8 | D8SHQ0 | Trans-cinnamate 4-hydroxylase; Belongs to the cytochrome P450 family. | Phenylalanine ammonia-lyase. | 0.921 |
D8QQC6_SELML | D8R8L2_SELML | D8QQC6 | D8R8L2 | Uncharacterized protein; Belongs to the arginase family. | Uncharacterized protein; Belongs to the arginase family. | 0.900 |
D8QQC6_SELML | PAL2-2 | D8QQC6 | D8SHQ0 | Uncharacterized protein; Belongs to the arginase family. | Phenylalanine ammonia-lyase. | 0.784 |
D8R4C0_SELML | D8RKD9_SELML | D8R4C0 | D8RKD9 | Prephenate/arogenate dehydrogenase domain-containing protein. | Prephenate/arogenate dehydrogenase domain-containing protein. | 0.900 |
D8R4C0_SELML | EMB2196-1 | D8R4C0 | D8R7L8 | Prephenate/arogenate dehydrogenase domain-containing protein. | Uncharacterized protein EMB2196-1. | 0.993 |
D8R4C0_SELML | EMB2196-2 | D8R4C0 | D8TG08 | Prephenate/arogenate dehydrogenase domain-containing protein. | Uncharacterized protein EMB2196-2. | 0.993 |
D8R4C0_SELML | PAL2-2 | D8R4C0 | D8SHQ0 | Prephenate/arogenate dehydrogenase domain-containing protein. | Phenylalanine ammonia-lyase. | 0.819 |
D8R4C0_SELML | TYDC5-1 | D8R4C0 | D8R3Z6 | Prephenate/arogenate dehydrogenase domain-containing protein. | Uncharacterized protein TYDC5-1. | 0.807 |
D8R4C0_SELML | TYDC5-2 | D8R4C0 | D8RAK9 | Prephenate/arogenate dehydrogenase domain-containing protein. | Uncharacterized protein TYDC5-2. | 0.807 |
D8R8L2_SELML | D8QQC6_SELML | D8R8L2 | D8QQC6 | Uncharacterized protein; Belongs to the arginase family. | Uncharacterized protein; Belongs to the arginase family. | 0.900 |
D8R8L2_SELML | PAL2-2 | D8R8L2 | D8SHQ0 | Uncharacterized protein; Belongs to the arginase family. | Phenylalanine ammonia-lyase. | 0.784 |
D8RKD9_SELML | D8R4C0_SELML | D8RKD9 | D8R4C0 | Prephenate/arogenate dehydrogenase domain-containing protein. | Prephenate/arogenate dehydrogenase domain-containing protein. | 0.900 |
D8RKD9_SELML | EMB2196-1 | D8RKD9 | D8R7L8 | Prephenate/arogenate dehydrogenase domain-containing protein. | Uncharacterized protein EMB2196-1. | 0.993 |
D8RKD9_SELML | EMB2196-2 | D8RKD9 | D8TG08 | Prephenate/arogenate dehydrogenase domain-containing protein. | Uncharacterized protein EMB2196-2. | 0.993 |
D8RKD9_SELML | PAL2-2 | D8RKD9 | D8SHQ0 | Prephenate/arogenate dehydrogenase domain-containing protein. | Phenylalanine ammonia-lyase. | 0.819 |
D8RKD9_SELML | TYDC5-1 | D8RKD9 | D8R3Z6 | Prephenate/arogenate dehydrogenase domain-containing protein. | Uncharacterized protein TYDC5-1. | 0.807 |
D8RKD9_SELML | TYDC5-2 | D8RKD9 | D8RAK9 | Prephenate/arogenate dehydrogenase domain-containing protein. | Uncharacterized protein TYDC5-2. | 0.807 |
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