STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8SKT2_SELMLRAB3GAP2_N domain-containing protein. (459 aa)    
Predicted Functional Partners:
D8QXS5_SELML
BSD domain-containing protein.
   
 0.974
D8RUJ5_SELML
BSD domain-containing protein.
   
 0.974
D8RV26_SELML
Uncharacterized protein.
   
 0.974
D8T048_SELML
Uncharacterized protein.
   
 0.974
Rab18-1
Rab family GTPase.
     
 0.882
D8SVI5_SELML
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
     
 0.766
D8T0M5_SELML
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
     
 0.766
Rab6-1
Rab family GTPase.
     
 0.732
D8RLA6_SELML
Uncharacterized protein.
   
 
 0.711
D8S2P8_SELML
Uncharacterized protein.
   
 
 0.711
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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