STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8SMC2_SELMLRING-type domain-containing protein. (432 aa)    
Predicted Functional Partners:
D8QNL5_SELML
FPG_CAT domain-containing protein.
   
  
 0.537
D8RDV2_SELML
FPG_CAT domain-containing protein.
   
  
 0.537
D8SNW6_SELML
Sde2_N_Ubi domain-containing protein.
     
 0.526
D8SSB3_SELML
Sde2_N_Ubi domain-containing protein.
     
 0.526
CDC45-1
Uncharacterized protein CDC45-1.
   
  
 0.524
CDC45-2
Uncharacterized protein CDC45-2.
   
  
 0.524
D8QNB5_SELML
Bromo domain-containing protein.
      
 0.493
D8RV46_SELML
SprT-like domain-containing protein.
      
 0.480
D8T076_SELML
SprT-like domain-containing protein.
      
 0.480
D8R0N6_SELML
Tify domain-containing protein.
   
 
 0.430
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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