STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8SMQ7_SELMLUncharacterized protein. (588 aa)    
Predicted Functional Partners:
D8QTH7_SELML
PHB domain-containing protein.
      
 0.573
D8SF09_SELML
Ribosomal_S10 domain-containing protein.
      
 0.572
D8R485_SELML
Plastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I. Belongs to the plastocyanin family.
   
 
 0.497
D8QSI5_SELML
S1-like domain-containing protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
      
 0.487
Sar1b-1
Sar1, ras family GTPase; Belongs to the small GTPase superfamily. SAR1 family.
     
 0.457
Sar1b-2
Sar1, ras family GTPase; Belongs to the small GTPase superfamily. SAR1 family.
     
 0.457
Sar1a-1
Sar1, ras family GTPase; Belongs to the small GTPase superfamily. SAR1 family.
     
 0.457
Sar1a-2
Sar1, ras family GTPase; Belongs to the small GTPase superfamily. SAR1 family.
     
 0.457
D8QPQ3_SELML
Uncharacterized protein.
      
 0.410
D8SKS2_SELML
Uncharacterized protein.
      
 0.410
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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