STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8SS38_SELMLNnrU domain-containing protein. (371 aa)    
Predicted Functional Partners:
D8RHP5_SELML
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
  
  
 0.990
D8S4W3_SELML
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
  
  
 0.990
D8RV23_SELML
Amino_oxidase domain-containing protein.
  
  
 0.969
D8T045_SELML
Amino_oxidase domain-containing protein.
  
  
 0.968
D8SNP8_SELML
NnrU domain-containing protein.
  
  
 
0.900
D8RVS5_SELML
Amino_oxidase domain-containing protein.
   
 
 0.807
D8S2I2_SELML
Amino_oxidase domain-containing protein.
   
 
 0.807
CYP97A14
Uncharacterized protein CYP97A14; Belongs to the cytochrome P450 family.
      
 0.806
D8RK54_SELML
Uncharacterized protein; Belongs to the cytochrome P450 family.
      
 0.806
D8RTT4_SELML
Uncharacterized protein.
      
 0.780
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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