STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8SYD4_SELMLHIT domain-containing protein. (118 aa)    
Predicted Functional Partners:
D8SHC7_SELML
Uncharacterized protein.
    
 0.666
D8QVD4_SELML
Uncharacterized protein.
    
 0.597
D8RF83_SELML
Uncharacterized protein.
    
 0.597
CDKD-1
Uncharacterized protein CDKD-1; Belongs to the protein kinase superfamily.
    
 0.565
LSM5
U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.
      
 0.499
D8RRX1_SELML
Uncharacterized protein.
   
 
 0.490
D8QYR6_SELML
Uncharacterized protein.
    
 0.485
D8R8X2_SELML
Uncharacterized protein.
    
 0.485
D8RBW2_SELML
Macro domain-containing protein.
     
 0.482
D8RXR4_SELML
Macro domain-containing protein.
     
 0.482
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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