STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8T2W6_SELMLPKS_ER domain-containing protein. (352 aa)    
Predicted Functional Partners:
MADS8-1
Type I MADS-box transcription factor.
    
 0.729
D8QYA6_SELML
Uncharacterized protein.
   
 
 0.443
D8R132_SELML
TPP_enzyme_N domain-containing protein.
   
 
 0.443
D8RTZ4_SELML
Uncharacterized protein.
   
 
 0.443
D8S196_SELML
TPP_enzyme_C domain-containing protein.
   
 
 0.443
D8S198_SELML
TPP_enzyme_N domain-containing protein.
   
 
 0.443
D8SRV3_SELML
Uncharacterized protein.
   
 
 0.443
D8SWS3_SELML
TPP_enzyme_N domain-containing protein.
   
 
 0.443
D8T1Z8_SELML
Uncharacterized protein.
   
 
 0.443
D8QMP7_SELML
Threonine dehydratase.
  
 
  0.436
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.