STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8T443_SELMLNuclear pore protein. (862 aa)    
Predicted Functional Partners:
D8R4U6_SELML
Uncharacterized protein.
   
 0.998
D8S446_SELML
Uncharacterized protein.
   
 0.998
D8RSV6_SELML
RRM Nup35-type domain-containing protein.
   
 0.987
D8SNT7_SELML
Uncharacterized protein.
   
 0.986
D8SS81_SELML
Uncharacterized protein.
   
 0.986
D8S1Q6_SELML
Uncharacterized protein.
   
 0.982
D8T999_SELML
Uncharacterized protein.
   
 0.982
D8RPE9_SELML
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.980
D8SK49_SELML
C2H2-type domain-containing protein.
    
 0.980
D8SM57_SELML
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.980
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.