STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DET2A-2Steroid 5-alpha-reductase DET2; Involved in a reduction step in the biosynthesis of the plant steroid, brassinolide. (261 aa)    
Predicted Functional Partners:
CPD-1
Uncharacterized protein CPD-1.
     
 0.949
ROT3B-1
Uncharacterized protein ROT3B-1; Belongs to the cytochrome P450 family.
     
 0.927
CYP90E3
Uncharacterized protein CYP90E3; Belongs to the cytochrome P450 family.
     
 0.927
ROT3A-2
Uncharacterized protein ROT3A-2.
     
 0.927
D8SC66_SELML
Uncharacterized protein.
      
 0.572
BAHDa6b-1
BAHD acyltransferase, clade I.
      
 0.505
D8SGA0_SELML
Uncharacterized protein.
      
 0.505
D8RCX7_SELML
AA_TRNA_LIGASE_II domain-containing protein.
      
 0.412
D8RQJ4_SELML
AA_TRNA_LIGASE_II domain-containing protein.
      
 0.412
D8RST3_SELML
AA_TRNA_LIGASE_II domain-containing protein.
      
 0.412
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.