STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8T895_SELMLRNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (430 aa)    
Predicted Functional Partners:
D8S8M8_SELML
Uncharacterized protein.
   
 0.993
D8R887_SELML
RPOL4c domain-containing protein.
    
 0.991
D8QXA0_SELML
Uncharacterized protein.
    
 0.989
D8RAS5_SELML
RPOLD domain-containing protein.
   
 0.984
D8RH60_SELML
RPOLD domain-containing protein.
   
 0.984
D8S7B0_SELML
Uncharacterized protein.
   
 0.984
D8SZ37_SELML
Uncharacterized protein.
   
 0.984
D8SUG5_SELML
SHS2_Rpb7-N domain-containing protein.
   
 0.981
D8SZY2_SELML
Uncharacterized protein.
   
 0.981
D8S1N7_SELML
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.979
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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